Title | Network Biology [electronic resource] : Methods and Applications / edited by Gerard Cagney, Andrew Emili |
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Imprint | Totowa, NJ : Humana Press, 2011 |
Connect to | http://dx.doi.org/10.1007/978-1-61779-276-2 |
Descript | XV, 437 p. 85 illus. online resource |
Analysis of Protein–Protein Interactions Using High-throughput Yeast Two-Hybrid Screens -- Identification of Mammalian Protein Complexes by Lentiviral-Based Affinity Purification and Mass Spectrometry -- Protein Networks Involved in Vesicle Fusion, Transport, and Storage Revealed by Array-Based Proteomics -- Identification and Relative Quantification of Native and Proteolytically Generated Protein C-termini from Complex Proteomes: C-terminome Analysis -- Construction of Protein Interaction Networks Based on the Label Free Quantitative Proteomics -- Studying Binding Specificities of Peptide Recognition Modules by High-Throughput Phage Display Selections -- Array-Based Synthetic Genetic Screens to Map Bacterial Pathways and Functional Networks in Escherichia coli -- Advanced Methods for High-Throughput Microscopy Screening of Genetically Modified Yeast Libraries -- Pooled Lentiviral shRNA Screening for Functional Genomics in Mammalian Cells -- Plant DNA Sequencing for Phylogenetic Analyses: From Plants to Sequences -- Using Coevolution to Predict Protein-Protein Interactions -- Visualizing Gene-Set Enrichment Results Using the Cytoscape Plugin Enrichment Map -- Quality Control Methodology for High-Throughput Protein-Protein Interaction Screening -- Filtering and Interpreting Large-Scale Experimental Protein-Protein Interaction Data -- Classification of Cancer Patients Using Pathway Analysis and Network Clustering -- Statistical Analysis of Dynamic Transcriptional Regulatory Network Structure -- Imputing and Predicting Quantitative Genetic Interactions in Epistatic MAPs -- Displaying Chemical Information on a Biological Network Using Cytoscape -- Modeling of Proteins and Their Assemblies with the Integrative Modeling Platform -- Predicting Node Characteristics from Molecular Networks -- Mathematical Modeling of Biomolecular Network Dynamics