Title | Plant Systems Biology [electronic resource] / edited by Dmitry A. Belostotsky |
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Imprint | Totowa, NJ : Humana Press, 2009 |
Connect to | http://dx.doi.org/10.1007/978-1-60327-563-7 |
Descript | XVI, 408 p. 43 illus., 2 illus. in color. online resource |
I: Systems Biology of Plant Gene Expression -- Gene-Specific and Genome-Wide ChIP Approaches to Study Plant Transcriptional Networks -- Genome-Wide Analysis of RNA-Protein Interactions in Plants -- Whole-Genome Microarrays: Applications and Technical Issues -- Manipulating Large-Scale Arabidopsis Microarray Expression Data: Identifying Dominant Expression Patterns and Biological Process Enrichment -- Applications of Ultra-high-Throughput Sequencing -- Isolation of Plant Polysomal mRNA by Differential Centrifugation and Ribosome Immunopurification Methods -- Chromatin Charting: Global Mapping of Epigenetic Effects -- Clone-Based Functional Genomics -- II: Networks, Pathways, Statistical Issues, and Novel Computational Tools -- Challenges and Approaches to Statistical Design and Inference in High-Dimensional Investigations -- Discrete Dynamic Modeling with Asynchronous Update, or How to Model Complex Systems in the Absence of Quantitative Information -- Quantification of Variation in Expression Networks -- Co-expression Analysis of Metabolic Pathways in Plants -- Integration of Metabolic Reactions and Gene Regulation -- Applying Word-Based Algorithms: The IMEter -- III: Imaging -- Live-Imaging and Image Processing of Shoot Apical Meristems of Arabidopsis thaliana -- Computer Vision as a Tool to Study Plant Development -- IV: Chemical Genetic, Metabolomic, and Integrative Methods for Plant Systems Biology -- Metabolomics of Plant Volatiles -- Chemical Genomics Approaches in Plant Biology -- Comparison of Quantitative Metabolite Imaging Tools and Carbon-13 Techniques for Fluxomics -- Democratization and Integration of Genomic Profiling Tools