Title | Marine Genomics [electronic resource] : Methods and Protocols / edited by Sarah J. Bourlat |
---|---|
Imprint | New York, NY : Springer New York : Imprint: Humana Press, 2016 |
Connect to | http://dx.doi.org/10.1007/978-1-4939-3774-5 |
Descript | X, 253 p. 46 illus., 24 illus. in color. online resource |
Sampling of Riverine or Marine Bacterial Communities in Remote Locations: From Field to Publication -- DNA Extraction Protocols for Whole Genome Sequencing in Marine Organisms -- High-Throughput Sequencing of Complete Mitochondrial Genomes -- Phylogenomics Using Transcriptome Data -- SNP Discovery Using Next Generation Transcriptomic Sequencing -- SNP-Arrays for Species Identification in Salmonids -- The Next Generation PCR-Based Quantification Method for Ambient Waters: Digital PCR -- Using Environmental DNA for Invasive Species Surveillance and Monitoring -- Microarrays/DNA Chips for the Detection of Waterborne Pathogens -- DNA Barcoding of Marine Metazoans -- DNA Barcoding Marine Biodiversity: Steps from Mere Cataloguing to Giving Reasons for Biological Differences -- Metabarcoding Marine Sediments: Preparation of Amplicon Libraries -- Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Dual-PCR Method -- Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Adaptor-Ligation Method -- Visualizing Patterns of Marine Eukaryotic Diversity from Metabarcoding Data Using QIIME -- Analysis of Illumina MiSeq Metabarcoding Data: Application to Benthic Indices for Environmental Monitoring